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2026 bioRxiv

Machine learning cross-platform proteomic imputation enables protein quality scoring and replication of epidemiological associations

L. Li, A. Alaa, Y. Tan, I. Demirel, S. Friedman, Q. Zha, R. Tracy, K. D. Taylor, B. Yu, C. M. Ballantyne, R. Deo, R. Dubin, M. Y. Tsai, G. M. Peloso, J. Brody, T. Austin, B. M. Psaty, J. Nicholas, L. M. Raffield, U. Tahir, J. Coresh, W. Hornsby, A. Chan, S. S. Rich, J. I. Rotter, P. Ganz, R. Gerszten, A. Philippakis, P. Natarajan, Z. Yu

paper

Machine learning cross-platform proteomic imputation enables protein quality scoring and replication of epidemiological associations

conference

2026 NeurIPS

LLMs can construct powerful representations and streamline sample-efficient supervised learning

I. Demirel, L. Shi, Z. Hussain, D. Sontag

paper code slides website

LLMs can construct powerful representations and streamline sample-efficient supervised learning

2026 ICML

Uncovering Bias Mechanisms in Observational Studies

I. Demirel*, Z. Hussain*, P.D. Bartolomeis, D. Sontag — *equal contribution

paper code

Uncovering Bias Mechanisms in Observational Studies

2025 NeurIPS

Prediction-powered Causal Inferences

R. Cadei, I. Demirel*, P.D. Bartolomeis*, L. Lindorfer, S. Cremer, C. Schmid, F. Locatello — *equal contribution

paper code

2025 NeurIPS, Time Series for Health

Using LLMs for Late Multimodal Sensor Fusion for Activity Recognition

I. Demirel, K. Thakkar, B. Elizalde, M. Espi Marques, A. Sarathy, Y. Bai, U. Srinivas, J. Xu, S. Ren, J. Narain — Work done during a summer internship at Apple.

paper

Using LLMs for Late Multimodal Sensor Fusion for Activity Recognition

2025 ICLR

Scalable Universal T-cell receptor embeddings from Adaptive Immune Repertoires

P. Chapfuwa, I. Demirel, L. Pisani, J. Zazo, E. Portugaly, J. Zahid, J. Greissl — Work done during a summer internship at Microsoft Research.

paper

Scalable Universal T-cell receptor embeddings from Adaptive Immune Repertoires

2024 ICML

Prediction-powered Generalization of Causal Inferences

I. Demirel, A. Alaa, A. Philippakis, D. Sontag

paper code slides

Prediction-powered Generalization of Causal Inferences

2024 AISTATS

Benchmarking Observational Studies with Experimental Data under Right-Censoring

I. Demirel, E.D. Brouwer, Z. Hussain, M. Oberst, A. Philippakis, D. Sontag

paper code slides

Benchmarking Observational Studies with Experimental Data under Right-Censoring

2023 AHA Scientific Sessions, Circulation

Association of Eicosanoid Metabolites With Cardiac Structure and Function

A. Roshandelpoor, J. Ma, I. Demirel, E. Lau, M. Alotaibi, M.F. Ramirez Fernandez Del Castillo, J. Parekh, A. Pan, N. Owunna, V. Varadarajan, M. Jain, S. Cheng, J.A.C.A. Lima, J.E. Ho

paper